Trichophyton rubrum - Laboratory diagnosis

Last Modified: June 15, 2026 by Reshma Maharjan

Laboratory diagnosis of Trichophyton rubrum

Laboratory diagnosis of Trichophyton rubrum is done by demonstration of fungal particles such as hyphae, and spores in the specimen.

Samples

  • Hair

  • Skin

  • Nail scrapping

Microscopy

Microscopy (direct microscopy) is performed following KOH preparation to demonstrate fungal particles in the specimen.

KOH preparation of Trichophyton rubrum under microscope (Source: ResearchGate)

KOH preparation

The procedure of KOH preparation for fungal infection diagnosis is as follows.

Procedure

  1. the specimen is placed on a clean, grease-free slide and a drop of 10-20% KOH solution is added to it

  2. the sample is covered with a coverslip and immediately viewed under a microscope

  3. the KOH preparation is examined again after 20 mins

  4. in skin or nail specimens, chains of spores or branching hyphae are seen

  5. in hair specimen, parallel rows of spores are observed outside (ectothrix) or inside (endothrix) the hair shaft

* infected hair shaft may also contain air spaces

* skin test does not distinguish active infection

Hair perforation test showing erosion by Trichophyton rubrum (Source: ResearchGate)

Hair perforation test

The hair perforation test is done mostly to distinguish Trichophyton rubrum from Trichophyton mentagrophytes, which are morphologically similar.

Trichophyton rubrum causes only surface erosion of the hair shaft while from Trichophyton mentagrophytes infection results in wedge-shaped perforation.

Procedure

  1. hair specimens (5-10mm in size) are placed in a Petri dish with 20ml distilled water and autoclaved

  2. sterile 10% yeast extract (2-3 drops) is added to the Petri dish

  3. the hair strands are inoculated with small fragments of test fungi that have been grown on SDA

  4. the inoculated hair strands are incubated at 25°C

  5. for up to a month, the inoculated hair strands are examined weekly after the addition of Lacto Phenol Cotton Blue (LPCB)

Trichophyton rubrum frontside (left) and reverse side (right) on SDA (Source: ResearchGate)

Culture

The culture of Trichophyton rubrum can be done as a diagnostic step.

The specimen is inoculated onto Sabouraud’s Dextrose Agar (SDA) incorporated with chloramphenicol and cycloheximide and incubated at 25 to 30°C aerobically for 1 to 3 weeks.

The fungi are identified on the basis of colony morphology, color, pigment production, and the presence/absence of microconidia or macroconidia.

Fresh culture of extracted from the agar plate using cellophane tape and placed on a slide containing a drop of Lacto Phenol Cotton Blue (LPCB). The preparation is viewed under a microscope to demonstrate the presence/absence of microconidia or macroconidia.

Trichophyton rubrum colonies are cottony which later turns velvety with red pigment on the reverse side. Numerous microconidia are numerous, teardrop-shaped, and present along the side of the hyphae. Microconidia are usually absent but if present are few in number, smooth, thin-walled, and pencil-shaped.

Trichophyton rubrum microconidia, macroconidia (Source: Creative biolabs)

Urease test

A urease test is done for distinguishing Trichophyton rubrum (urease negative) from Trichophyton mentagrophytes (urease positive).

Procedure

  1. a sterile Christensen’s urea agar is taken and inoculated with test fungi

  2. the test tube is incubated at 25°C for 5 days

  3. if the color of the agar changes to pink in color, it is urease positive

Molecular test

The molecular tests used for the diagnosis of Trichophyton rubrum are:

  • PCR-reverse line blot test

  • real-time PCR test

  • multiplex PCR test

  • PCR-ELISA test

  • MALDI-TOF test

Related Article

Fungal Culture

Fungal Culture

This method is a gold standard in mycology....

Wright's Stain

Wright's Stain

Since Wright’s stain easily distinguishes between blood cells, this procedu...

Calcofluor White (CFW) Staining

Calcofluor White (CFW) Staining

Calcofluor White (CFW) is a non-specific fluorescent blue dye used in biolo...

Fungal Infections - Specimen Collection, Transport and Processing

Fungal Infections - Specimen Collection, Transport and Processing

Laboratory diagnosis of fungal infection is highly dependent on the quality...

Clinical classification of Mycosis

Clinical classification of Mycosis

Mycosis is a human infection caused by fungus. Pathogenic fungi may or may ...

Medically important fungi

Medically important fungi

Medically important fungi can be differentiated into numerous types. ...

Mycology

Mycology

Mycology is the study of fungi....

Trichophyton tonsurans

Trichophyton tonsurans

Trichophyton mentagrophytes can produce melanin which acts as an antioxidan...

Trichophyton mentagrophytes

Trichophyton mentagrophytes

Human-to-human transmission occurs by some genetic variants e.g. Type VII a...

Pneumocystis jirovecii

Pneumocystis jirovecii

P. jirovecii is the causative agent of interstitial plasma cell pneumonia...